org.coolmap.core.util.bioparser.geosoft

Class ArrayTable

java.lang.Object

org.coolmap.core.util.bioparser.geosoft.ArrayTable

public class ArrayTable
extends java.lang.Object

Constructor Summary

Constructors

Constructor and Description
ArrayTable(java.lang.Integer rowCount, java.lang.Integer columnCount)

Method Summary

Modifier and Type	Method and Description
void	addAttribute(java.lang.String probeName, java.lang.String attributeName, java.lang.String value)
void	addMapping(java.lang.String geneSymbol, java.lang.String geneID)
com.google.common.collect.Table<java.lang.String,java.lang.String,java.lang.String>	getAttributes()
java.lang.String[]	getColumnNames()
com.google.common.collect.LinkedHashMultimap<java.lang.String,java.lang.String>	getGeneSymbolToProbeIDMapping()
java.lang.String[]	getRowNames()
java.lang.String[]	getRowSymbols()
java.lang.Double	getValue(int row, int column)
void	printAttribute()
void	printData()
void	printMapping()
void	setColumnName(int column, java.lang.String name)
void	setRowNames(int row, java.lang.String name, java.lang.String symbol)
void	setValue(int row, int column, java.lang.Double value)
java.lang.String	toString()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

ArrayTable

public ArrayTable(java.lang.Integer rowCount,
                  java.lang.Integer columnCount)

Method Detail

getGeneSymbolToProbeIDMapping

public com.google.common.collect.LinkedHashMultimap<java.lang.String,java.lang.String> getGeneSymbolToProbeIDMapping()

getAttributes

public com.google.common.collect.Table<java.lang.String,java.lang.String,java.lang.String> getAttributes()

getRowNames

public java.lang.String[] getRowNames()

getRowSymbols

public java.lang.String[] getRowSymbols()

getColumnNames

public java.lang.String[] getColumnNames()

toString

public java.lang.String toString()

Overrides:

toString in class java.lang.Object

addMapping

public void addMapping(java.lang.String geneSymbol,
                       java.lang.String geneID)

setValue

public void setValue(int row,
                     int column,
                     java.lang.Double value)

setColumnName

public void setColumnName(int column,
                          java.lang.String name)

setRowNames

public void setRowNames(int row,
                        java.lang.String name,
                        java.lang.String symbol)

printData

public void printData()

printMapping

public void printMapping()

getValue

public java.lang.Double getValue(int row,
                                 int column)

printAttribute

public void printAttribute()

addAttribute

public void addAttribute(java.lang.String probeName,
                         java.lang.String attributeName,
                         java.lang.String value)