Hierarchy For All Packages

Package Hierarchies:

• org.coolmap.core,
• org.coolmap.core.api.aggregation,
• org.coolmap.core.api.aggregation.util,
• org.coolmap.core.api.data.matrix,
• org.coolmap.core.api.data.ontology,
• org.coolmap.core.api.io.data,
• org.coolmap.core.api.io.ontology,
• org.coolmap.core.api.util,
• org.coolmap.core.application,
• org.coolmap.core.application.exception,
• org.coolmap.core.application.io,
• org.coolmap.core.application.io.external,
• org.coolmap.core.application.io.internal.cmatrix,
• org.coolmap.core.application.io.internal.cmatrix.interfaces,
• org.coolmap.core.application.io.internal.contology,
• org.coolmap.core.application.io.internal.coolmapobject,
• org.coolmap.core.application.io.internal.dataProperty,
• org.coolmap.core.application.listeners,
• org.coolmap.core.application.plugin,
• org.coolmap.core.application.state,
• org.coolmap.core.application.ui.filter,
• org.coolmap.core.application.ui.object,
• org.coolmap.core.application.ui.ontology,
• org.coolmap.core.application.ui.property,
• org.coolmap.core.application.ui.util,
• org.coolmap.core.application.utils,
• org.coolmap.core.application.utils.viewportActions,
• org.coolmap.core.application.widget,
• org.coolmap.core.application.widget.impl,
• org.coolmap.core.application.widget.impl.console,
• org.coolmap.core.application.widget.impl.ontology,
• org.coolmap.core.application.widget.listener,
• org.coolmap.core.canvas,
• org.coolmap.core.canvas.action,
• org.coolmap.core.canvas.listeners,
• org.coolmap.core.canvas.renderer.impl,
• org.coolmap.core.canvas.renderer.model,
• org.coolmap.core.canvas.ui,
• org.coolmap.core.canvas.ui.sidemaps,
• org.coolmap.core.canvas.ui.sidemaps.impl,
• org.coolmap.core.canvas.ui.sidemaps.listener,
• org.coolmap.core.canvas.ui.sidemaps.task,
• org.coolmap.core.canvas.ui.sidemaps.util,
• org.coolmap.core.canvas.ui.viewmaps,
• org.coolmap.core.data,
• org.coolmap.core.data.action,
• org.coolmap.core.data.aggregator,
• org.coolmap.core.data.aggregator.impl,
• org.coolmap.core.data.annotation,
• org.coolmap.core.data.cmatrix.impl,
• org.coolmap.core.data.cmatrix.model,
• org.coolmap.core.data.cmatrixview.model,
• org.coolmap.core.data.cmatrixview.utils,
• org.coolmap.core.data.entity.model,
• org.coolmap.core.data.entity.sampleProperty,
• org.coolmap.core.data.entity.sampleProperty.action,
• org.coolmap.core.data.entity.sampleProperty.model,
• org.coolmap.core.data.entity.task,
• org.coolmap.core.data.listeners,
• org.coolmap.core.data.ontology,
• org.coolmap.core.data.ontology.model,
• org.coolmap.core.data.ontology.util,
• org.coolmap.core.data.ontology.util.edgeattributes,
• org.coolmap.core.data.snippet,
• org.coolmap.core.data.state,
• org.coolmap.core.data.state.misc,
• org.coolmap.core.util,
• org.coolmap.core.util.bioparser,
• org.coolmap.core.util.bioparser.geosoft,
• org.coolmap.core.util.bioparser.gseagmt,
• org.coolmap.core.util.bioparser.simpleobo,
• org.coolmap.core.util.filter,
• org.coolmap.core.util.filter.impl,
• org.coolmap.core.util.filter.util,
• org.coolmap.core.util.graphics,
• org.coolmap.core.util.network,
• org.coolmap.core.util.statistics,
• org.coolmap.core.util.statistics.test

Class Hierarchy

• java.lang.Object
  • javax.swing.AbstractAction (implements javax.swing.Action, java.lang.Cloneable, java.io.Serializable)
    • org.coolmap.core.application.utils.viewportActions.CascadeMapsAction
    • org.coolmap.core.application.utils.viewportActions.CenterSelectionAction
    • org.coolmap.core.canvas.action.CopyMatrixFromSelectedRegionAction
    • org.coolmap.core.canvas.action.CopyMatrixFromWholeViewAction
    • org.coolmap.core.application.state.DeleteStateAction
    • org.coolmap.core.canvas.action.ExportCanvasAsImageAction
    • org.coolmap.core.canvas.action.ExportCoolMapObjectAsTSVAction
    • org.coolmap.core.data.entity.sampleProperty.action.ImportContinuousPropertyGroupFromFileAction
    • org.coolmap.core.data.entity.sampleProperty.action.ImportPropertyIDGroupSettingFromOBOAction
    • org.coolmap.core.data.entity.sampleProperty.action.ImportPropertyNameGroupSettingFromOBOAction
    • org.coolmap.core.application.state.LoadStateAction
    • org.coolmap.core.canvas.action.PasteColumnNodesAction
    • org.coolmap.core.canvas.action.PasteRowNodesAction
    • org.coolmap.core.application.state.RedoAction
    • org.coolmap.core.data.action.RenameActiveCoolMapObjectAction
    • org.coolmap.core.data.action.RenameCoolMapObjectAction
    • org.coolmap.core.application.state.SaveStateAction
    • org.coolmap.core.application.utils.TaskCancellationListener
    • org.coolmap.core.application.utils.viewportActions.TileMapsAction
    • org.coolmap.core.application.state.UndoAction
    • org.coolmap.core.application.utils.viewportActions.ZoomInAction
    • org.coolmap.core.application.utils.viewportActions.ZoomOutAction
  • javax.swing.AbstractCellEditor (implements javax.swing.CellEditor, java.io.Serializable)
    • org.coolmap.core.application.ui.util.JTableButtonCell (implements java.awt.event.ActionListener, java.awt.event.MouseListener, javax.swing.table.TableCellEditor, javax.swing.table.TableCellRenderer)
  • org.coolmap.core.data.cmatrix.model.AbstractCoolMapMatrix<T> (implements org.coolmap.core.api.data.matrix.CoolMapMatrix<T>)
    • org.coolmap.core.data.cmatrix.model.Model2DCMatrix<T>
      • org.coolmap.core.data.cmatrix.impl.DoubleCoolMapMatrix
    • org.coolmap.core.data.cmatrix.model.NetworkCoolMapMatrix
  • org.coolmap.core.data.ontology.AbstractFileCoolMapOntologyImporter (implements org.coolmap.core.api.io.ontology.CoolMapOntologyImporter)
    • org.coolmap.core.application.io.internal.contology.GMTFormatCoolMapOntologyImporter
    • org.coolmap.core.application.io.internal.contology.OWLOrOBOFormatCoolMapOntologyImporter
    • org.coolmap.core.application.io.internal.contology.SimpleTwoColumnFormatCoolMapOntologyImporter
  • org.coolmap.core.api.aggregation.AbstractIdToSidePanelDisplayConverterNoOntology<VALUE>
    • org.coolmap.core.api.aggregation.DefaultIdToSidePanelDisplayConverterNoOntology<VALUE>
    • org.coolmap.core.api.aggregation.PropertyBasedIdToSidePanelDisplayConverterNoOntology<VALUE>
  • org.coolmap.core.api.aggregation.AbstractIdToSidePanelDisplayConverterUseOntology<VALUE>
    • org.coolmap.core.api.aggregation.DefaultIdToSidePanelDisplayConverterUseOntology<VALUE>
    • org.coolmap.core.api.aggregation.PropertyBasedIdToSidePanelDisplayConverterUseOntology<VALUE>
  • org.coolmap.core.api.aggregation.AbstractSidePanelValueAggregator<VALUE,AggregationMethodEnum> (implements org.coolmap.core.api.aggregation.SidePanelValueAggregator<VALUE,AggregationMethodEnum>)
    • org.coolmap.core.api.aggregation.SidePanelCategoricalValueAggregator
    • org.coolmap.core.api.aggregation.SidePanelContinuousValueAggregator
  • org.coolmap.core.application.state.AdditionalStateTrackers (implements org.coolmap.core.application.listeners.DataStorageListener)
  • org.coolmap.core.util.statistics.AggregationUtil
  • org.coolmap.core.util.bioparser.geosoft.Annotation
  • org.coolmap.core.data.annotation.AnnotationStorage
  • org.coolmap.core.util.bioparser.geosoft.ArrayTable
  • org.coolmap.core.util.bioparser.Bioparser
  • org.coolmap.core.util.BrowserLauncher
  • org.coolmap.core.data.aggregator.CAggregator<BASE,VIEW> (implements org.coolmap.core.util.StateSavable)
    • org.coolmap.core.data.aggregator.impl.DoubleDoubleMax
    • org.coolmap.core.data.aggregator.impl.DoubleDoubleMean
    • org.coolmap.core.data.aggregator.impl.DoubleDoubleMedian
    • org.coolmap.core.data.aggregator.impl.DoubleDoubleMin
    • org.coolmap.core.data.aggregator.impl.DoubleDoubleSD
    • org.coolmap.core.data.aggregator.impl.DoubleDoubleSum
    • org.coolmap.core.data.aggregator.impl.DoubleDoubleVariance
    • org.coolmap.core.data.aggregator.impl.DoubleToNetwork
    • org.coolmap.core.data.aggregator.impl.PassThrough
  • org.coolmap.core.util.graphics.CAnimator
  • org.coolmap.core.application.widget.listener.CanvasWidgetPropertyChangedListener (implements java.beans.PropertyChangeListener)
  • java.awt.CardLayout (implements java.awt.LayoutManager2, java.io.Serializable)
    • org.coolmap.core.application.ui.util.DynamicResizedCardLayout
  • org.coolmap.core.util.CImageGradient
  • org.coolmap.core.application.listeners.CMatrixAdaptor (implements org.coolmap.core.application.listeners.CMatrixListener)
  • org.coolmap.core.application.widget.impl.console.CMConsole
  • org.coolmap.core.data.listeners.CObjectAdaptor (implements org.coolmap.core.data.listeners.CObjectListener)
  • org.coolmap.core.canvas.ui.sidemaps.ColumnMap<BASE,VIEW>
    • org.coolmap.core.canvas.ui.sidemaps.impl.ColumnHighlighter<VIEW> (implements org.coolmap.core.canvas.ui.sidemaps.SidePanelHighlighter<BASE,VIEW,VALUE>)
    • org.coolmap.core.canvas.ui.sidemaps.impl.ColumnLabels (implements java.awt.datatransfer.ClipboardOwner)
    • org.coolmap.core.canvas.ui.sidemaps.impl.ColumnTree (implements org.coolmap.core.canvas.ui.sidemaps.SideTree)
  • java.awt.Component (implements java.awt.image.ImageObserver, java.awt.MenuContainer, java.io.Serializable)
    • java.awt.Container
      • javax.swing.JComponent (implements java.io.Serializable)
        • javax.swing.JLabel (implements javax.accessibility.Accessible, javax.swing.SwingConstants)
          • org.coolmap.core.util.ColorLabel
        • javax.swing.JLayeredPane (implements javax.accessibility.Accessible)
          • org.coolmap.core.canvas.ui.sidemaps.SideMapDrawer (implements java.awt.event.ComponentListener)
            • org.coolmap.core.canvas.ui.ColDrawer
            • org.coolmap.core.canvas.ui.RowDrawer
        • javax.swing.JPanel (implements javax.accessibility.Accessible)
          • org.coolmap.core.application.ui.util.DelimitedFilePreviewPanel
            • org.coolmap.core.application.ui.ontology.ImportSimpleTwoColumnOntologyPanel
            • org.coolmap.core.application.ui.ontology.MappingFileSelectionPanel
          • org.coolmap.core.application.ui.ontology.GenerateOntologyFromDataPropertyTablePanel (implements org.coolmap.core.data.ontology.CanProduceOntology, org.coolmap.core.application.listeners.DataPropertyTableListener)
          • org.coolmap.core.util.graphics.GradientEditorPanel
          • org.coolmap.core.canvas.ui.HighlightLayer
          • org.coolmap.core.application.ui.ontology.OntologyImportingPanel (implements org.coolmap.core.data.ontology.CanProduceOntology)
          • org.coolmap.core.application.ui.ontology.OntologySelectionPanel (implements org.coolmap.core.data.ontology.CanProduceOntology)
          • org.coolmap.core.canvas.ui.ProgressMask
          • org.coolmap.core.canvas.ui.sidemaps.SideMapDrawer.DrawerHandle (implements java.awt.event.MouseListener, java.awt.event.MouseMotionListener)
        • javax.swing.JTable (implements javax.accessibility.Accessible, javax.swing.event.CellEditorListener, javax.swing.event.ListSelectionListener, javax.swing.event.RowSorterListener, javax.swing.Scrollable, javax.swing.event.TableColumnModelListener, javax.swing.event.TableModelListener)
          • org.coolmap.core.application.ui.util.DataMatrixTableRowHeader (implements javax.swing.event.ChangeListener)
      • java.awt.Window (implements javax.accessibility.Accessible)
        • java.awt.Dialog
          • javax.swing.JDialog (implements javax.accessibility.Accessible, javax.swing.RootPaneContainer, javax.swing.WindowConstants)
            • org.coolmap.core.application.ui.util.ConfirmOrCancelDialog
              • org.coolmap.core.application.ui.property.AddPropertyBasedAggregationDialog (implements org.coolmap.core.application.listeners.ActiveCoolMapChangedListener, java.awt.event.ItemListener)
              • org.coolmap.core.application.ui.ontology.ApplyOntologyToSideTreeDialog
              • org.coolmap.core.application.ui.property.AssignContinuityTypeDialog
              • org.coolmap.core.application.ui.object.CoolMapObjectPropertyDetailDialog
              • org.coolmap.core.application.ui.object.DataImportingDialog
              • org.coolmap.core.application.ui.ontology.ExportOntologyDialog
              • org.coolmap.core.application.ui.filter.FilterConfigDialog (implements org.coolmap.core.application.listeners.ActiveCoolMapChangedListener, java.awt.event.ItemListener)
              • org.coolmap.core.application.ui.ontology.GenerateOntologyFromDataPropertyTableDialog
              • org.coolmap.core.application.ui.property.HighlightPropertyToSidePanelDialog
              • org.coolmap.core.application.ui.property.ImportDataPropertyTableDialog
              • org.coolmap.core.application.ui.ontology.MappingDataNodeToOntologyNodeDialog
              • org.coolmap.core.application.ui.ontology.OntologyImportingDialog
              • org.coolmap.core.application.ui.object.SaveDataDialog
            • org.coolmap.core.canvas.ui.sidemaps.util.ExpandingControlDialog (implements org.coolmap.core.canvas.ui.sidemaps.listener.NodeToExpandEventListener, org.coolmap.core.canvas.ui.sidemaps.listener.SideTreeNodeListExpandingListener)
            • org.coolmap.core.data.cmatrixview.utils.SortingConfigDialog
            • org.coolmap.core.application.utils.TaskDialog
        • java.awt.Frame (implements java.awt.MenuContainer)
          • javax.swing.JFrame (implements javax.accessibility.Accessible, javax.swing.RootPaneContainer, javax.swing.WindowConstants)
            • org.coolmap.core.application.CoolMapMainFrame
            • org.coolmap.core.util.network.GraphFrame
  • org.coolmap.core.data.ontology.model.COntologyAttribute
  • org.coolmap.core.data.ontology.util.COntologyComparator (implements java.util.Comparator<T>)
  • org.coolmap.core.data.ontology.util.edgeattributes.COntologyEdgeAttributeImpl
  • org.coolmap.core.data.ontology.model.COntologyPreset
  • org.coolmap.core.data.ontology.util.COntologyUtils
  • org.coolmap.core.CoolMap
  • org.coolmap.core.util.CoolMapConfig
  • org.coolmap.core.util.statistics.CoolMapDataUtil
  • org.coolmap.core.util.CoolMapDoubleMatrix
  • org.coolmap.core.canvas.ui.viewmaps.CoolMapLayer<BASE,VIEW> (implements org.coolmap.core.canvas.ui.viewmaps.MapLayer<BASE,VIEW>)
  • org.coolmap.core.application.CoolMapMaster
  • org.coolmap.core.data.CoolMapObject<BASE,VIEW>
  • org.coolmap.core.application.io.external.CoolMapObjectImporterFromGEOSOFT (implements org.coolmap.core.application.io.external.CoolMapObjectImporter)
  • org.coolmap.core.application.io.external.CoolMapObjectImporterFromXLS (implements org.coolmap.core.application.io.external.CoolMapObjectImporter)
  • org.coolmap.core.data.ontology.model.CoolMapOntologyImpl (implements org.coolmap.core.api.data.ontology.CoolMapOntology)
  • org.coolmap.core.util.CoolMapSplashScreen
  • org.coolmap.core.data.state.CoolMapState
  • org.coolmap.core.canvas.CoolMapView<BASE,VIEW>
  • org.coolmap.core.canvas.listeners.CViewAdaptor (implements org.coolmap.core.canvas.listeners.CViewListener)
  • org.coolmap.core.util.bioparser.geosoft.Database
  • org.coolmap.core.application.utils.DataMaster
  • org.coolmap.core.data.entity.sampleProperty.model.DataProperty<T>
    • org.coolmap.core.data.entity.sampleProperty.model.CategorizedDataProperty
    • org.coolmap.core.data.entity.sampleProperty.model.ContinuousDataProperty
  • org.coolmap.core.data.entity.sampleProperty.model.DataPropertyGroup<VALUE>
    • org.coolmap.core.data.entity.sampleProperty.model.CategorizedDataPropertyGroup<VALUE>
    • org.coolmap.core.data.entity.sampleProperty.model.ContinuousDataPropertyGroup
  • org.coolmap.core.data.entity.sampleProperty.model.DataPropertyGroupSetting<PROPERTY,VALUE>
    • org.coolmap.core.data.entity.sampleProperty.model.CategorizedDataPropertyGroupSetting<PROPERTY,VALUE>
    • org.coolmap.core.data.entity.sampleProperty.model.ContinuousDataPropertyGroupSetting<PROPERTY>
  • org.coolmap.core.data.entity.model.DataPropertyTable<ROW,PROPERTY,VALUE>
  • org.coolmap.core.util.bioparser.geosoft.Dataset
  • org.coolmap.core.application.listeners.DataStorageAdaptor (implements org.coolmap.core.application.listeners.DataStorageListener)
  • org.coolmap.core.data.cmatrix.impl.DataTableBackedCoolMapMatrix (implements org.coolmap.core.api.data.matrix.CoolMapMatrix<T>)
  • org.coolmap.core.application.io.internal.cmatrix.DefaultCoolMapMatrixExporter (implements org.coolmap.core.application.io.internal.cmatrix.interfaces.InternalCoolMapMatrixExporter)
  • org.coolmap.core.application.io.internal.dataProperty.DefaultDataPropertyTableExporter (implements org.coolmap.core.application.io.internal.dataProperty.InternalDataPropertyTableExporter)
  • org.coolmap.core.application.io.internal.dataProperty.DefaultDataPropertyTableImporter (implements org.coolmap.core.application.io.internal.dataProperty.InternalDataPropertyTableImporter)
  • org.coolmap.core.application.io.internal.cmatrix.DoubleCoolMapMatrixImporter (implements org.coolmap.core.api.io.data.CoolMapMatrixImporter<T>)
  • org.coolmap.core.util.network.Edge
  • java.util.EventObject (implements java.io.Serializable)
    • org.coolmap.core.canvas.ui.sidemaps.listener.NodeToExpandEvent
    • org.coolmap.core.canvas.ui.sidemaps.listener.SideTreeExpandingFinishedEvent
  • org.coolmap.core.canvas.action.ExportCoolMapViewDataAction
  • org.coolmap.core.util.bioparser.geosoft.FieldConstants
  • javax.swing.filechooser.FileFilter
    • org.coolmap.core.util.FileOnlyExtensionFilter
  • org.coolmap.core.canvas.ui.viewmaps.FilterLayer (implements org.coolmap.core.canvas.ui.viewmaps.MapLayer<BASE,VIEW>)
  • org.coolmap.core.util.bioparser.geosoft.GeoSOFT
  • org.coolmap.core.util.bioparser.gseagmt.GmtEntry
  • org.coolmap.core.api.aggregation.IdToSidePanelDisplayConverter.SidePanelValueColorPair<VALUE>
  • org.coolmap.core.application.io.internal.coolmapobject.InternalCoolMapObjectIO
  • org.coolmap.core.application.io.internal.contology.InternalCoolMapOntologyIO
  • org.coolmap.core.application.io.IOHelper
  • org.coolmap.core.application.io.IOMaster
  • org.coolmap.core.application.io.IOTerm
  • org.coolmap.core.util.network.LinLogLayout
  • org.coolmap.core.util.network.LNetwork
  • org.coolmap.core.application.utils.Logger
  • org.coolmap.core.application.utils.LongTask (implements java.lang.Runnable)
    • org.coolmap.core.data.entity.task.GenerateOntologyBaseOnSamplePropertyTask
    • org.coolmap.core.data.entity.task.ImportingDataPropertyTableTask
    • org.coolmap.core.canvas.ui.sidemaps.task.NewViewWithPropertyBasedAggregationTask
      • org.coolmap.core.canvas.ui.sidemaps.task.NewViewWithColumnPropertyBasedAggregationTask
      • org.coolmap.core.canvas.ui.sidemaps.task.NewViewWithRowPropertyBasedAggregationTask
  • org.coolmap.core.util.network.Main
  • org.coolmap.core.canvas.ui.MatrixCell
  • org.coolmap.core.util.MatrixUtils
  • org.coolmap.core.application.utils.Messenger
  • org.coolmap.core.util.network.MinimizerBarnesHut
  • org.coolmap.core.util.network.MinimizerClassic
  • org.coolmap.core.util.network.Node
  • org.coolmap.core.canvas.ui.sidemaps.util.NodeListToExpand
  • org.coolmap.core.application.widget.impl.ontology.OntologyBrowser
  • org.coolmap.core.data.ontology.util.OntologyHelper
  • org.coolmap.core.util.OntologyPermutator
  • org.coolmap.core.util.network.OptimizerModularity
  • org.coolmap.core.application.plugin.PluginMaster
  • org.coolmap.core.data.annotation.PointAnnotation (implements java.lang.Comparable<T>)
  • org.coolmap.core.data.aggregator.PropertyBasedAggregation<T>
    • org.coolmap.core.data.aggregator.ColumnPropertyBasedDoubleAggregation
    • org.coolmap.core.data.aggregator.RowPropertyBasedAggregation<T>
      • org.coolmap.core.data.aggregator.RowPropertyBasedDoubleAggregation
  • org.coolmap.core.util.RangeComparator (implements java.util.Comparator<T>)
  • javax.swing.RowFilter<M,I>
    • org.coolmap.core.application.ui.util.SearchableTableRowFilter
  • org.coolmap.core.canvas.ui.sidemaps.RowMap<BASE,VIEW>
    • org.coolmap.core.canvas.ui.sidemaps.impl.RowHighlighter<VALUE> (implements org.coolmap.core.canvas.ui.sidemaps.SidePanelHighlighter<BASE,VIEW,VALUE>)
    • org.coolmap.core.canvas.ui.sidemaps.impl.RowLabels (implements java.awt.datatransfer.ClipboardOwner)
    • org.coolmap.core.canvas.ui.sidemaps.impl.RowTree (implements org.coolmap.core.canvas.ui.sidemaps.SideTree)
  • org.coolmap.core.data.entity.sampleProperty.SamplePropertyMaster
  • org.coolmap.core.data.entity.sampleProperty.model.SamplePropertyMatrix
  • org.coolmap.core.application.utils.Session
  • org.coolmap.core.canvas.ui.sidemaps.SideMapDrawer.TargetDrawerContainerToggle (implements org.jdesktop.core.animation.timing.TimingTarget)
  • org.coolmap.core.canvas.ui.sidemaps.SideMapDrawer.TargetDrawerToggle (implements org.jdesktop.core.animation.timing.TimingTarget)
  • org.coolmap.core.api.aggregation.SidePanelCategoricalValueToColorMapper (implements org.coolmap.core.api.aggregation.SidePanelValueToColorMapper<VALUE>)
  • org.coolmap.core.api.aggregation.SidePanelContinuousValueToColorMapper (implements org.coolmap.core.api.aggregation.SidePanelValueToColorMapper<VALUE>)
  • org.coolmap.core.canvas.ui.sidemaps.task.SideTreeNodeExpandingTask (implements org.coolmap.core.application.listeners.ActiveCoolMapChangedListener)
    • org.coolmap.core.canvas.ui.sidemaps.task.ColumnTreeNodeExpandingTaskImpl
    • org.coolmap.core.canvas.ui.sidemaps.task.RowTreeNodeExpandingTaskImpl
  • org.coolmap.core.canvas.ui.sidemaps.util.SideTreeUtil
  • org.coolmap.core.util.bioparser.simpleobo.SimpleOBOEntry
  • org.coolmap.core.util.bioparser.simpleobo.SimpleOBOTree
  • org.coolmap.core.data.snippet.SnippetConverter (implements org.coolmap.core.util.StateSavable)
    • org.coolmap.core.data.snippet.DoubleSnippet1_3
  • org.coolmap.core.data.snippet.SnippetMaster
  • org.coolmap.core.data.cmatrixview.utils.SortTracker
  • org.coolmap.core.application.state.StateQueue
  • org.coolmap.core.application.state.StateStorageMaster
  • org.coolmap.core.application.state.StateStorageMasterListeners (implements org.coolmap.core.application.listeners.ActiveCoolMapChangedListener)
  • org.coolmap.core.util.bioparser.geosoft.Subset
  • org.coolmap.core.util.TableCache<T>
  • org.coolmap.core.application.utils.TaskEngine
  • org.coolmap.core.util.statistics.test.TestResult
  • java.lang.Throwable (implements java.io.Serializable)
    • java.lang.Exception
      • org.coolmap.core.application.exception.OntologyMalformedException
  • org.coolmap.core.util.Tools
  • javax.swing.TransferHandler (implements java.io.Serializable)
    • org.coolmap.core.application.ui.util.TableRowTransferHandler
  • org.coolmap.core.util.graphics.UI
  • org.coolmap.core.util.filter.ViewFilter<VIEW> (implements org.coolmap.core.util.filter.Filter<VIEW>)
    • org.coolmap.core.util.filter.ColumnDoubleFilter
      • org.coolmap.core.util.filter.impl.ColumnDoubleEqualFilter
      • org.coolmap.core.util.filter.impl.ColumnDoubleLargerFilter
      • org.coolmap.core.util.filter.impl.ColumnDoubleLargerOrEqualFilter
      • org.coolmap.core.util.filter.impl.ColumnDoubleSmallerFilter
      • org.coolmap.core.util.filter.impl.ColumnDoubleSmallerOrEqualFilter
    • org.coolmap.core.util.filter.impl.CombinationFilter<VIEW>
    • org.coolmap.core.util.filter.RowDoubleFilter
      • org.coolmap.core.util.filter.impl.RowDoubleEqualFilter
      • org.coolmap.core.util.filter.impl.RowDoubleLargerFilter
      • org.coolmap.core.util.filter.impl.RowDoubleLargerOrEqualFilter
      • org.coolmap.core.util.filter.impl.RowDoubleSmallerFilter
      • org.coolmap.core.util.filter.impl.RowDoubleSmallerOrEqualFilter
    • org.coolmap.core.util.filter.ViewDoubleFilter
      • org.coolmap.core.util.filter.impl.ViewDoubleEqualFilter
      • org.coolmap.core.util.filter.impl.ViewDoubleLargerOrEqualToFilter
      • org.coolmap.core.util.filter.impl.ViewDoubleLargerThanFilter
      • org.coolmap.core.util.filter.impl.ViewDoubleSmallerFilter
      • org.coolmap.core.util.filter.impl.ViewDoubleSmallerOrEqualToFilter
  • org.coolmap.core.util.filter.ViewFilterFactory
  • org.coolmap.core.canvas.renderer.model.ViewRenderer<VIEW> (implements org.coolmap.core.util.StateSavable)
    • org.coolmap.core.canvas.renderer.impl.NumberToBar
      • org.coolmap.core.canvas.renderer.impl.NumberToLine
      • org.coolmap.core.canvas.renderer.impl.NumberToSeries
    • org.coolmap.core.canvas.renderer.impl.NumberToBoxPlot
    • org.coolmap.core.canvas.renderer.impl.NumberToColor (implements java.awt.event.ActionListener, java.awt.event.ItemListener)
    • org.coolmap.core.canvas.renderer.impl.NumberToSortedBar
    • org.coolmap.core.canvas.renderer.impl.TextRenderer
  • org.coolmap.core.data.cmatrixview.model.VMatrix<BASE,VIEW>
  • org.coolmap.core.data.cmatrixview.model.VNode
  • org.coolmap.core.data.cmatrixview.utils.VNodeComparator (implements java.util.Comparator<T>)
  • org.coolmap.core.data.cmatrixview.utils.VNodeHeightComparator (implements java.util.Comparator<T>)
  • org.coolmap.core.data.cmatrixview.utils.VNodeIndexComparator (implements java.util.Comparator<T>)
  • org.coolmap.core.data.cmatrixview.utils.VNodeNameComparator (implements java.util.Comparator<T>)
  • org.coolmap.core.application.widget.Widget (implements org.coolmap.core.util.StateSavable)
    • org.coolmap.core.application.widget.impl.WidgetAggregator (implements org.coolmap.core.application.listeners.ActiveCoolMapChangedListener)
    • org.coolmap.core.application.widget.impl.WidgetAssociatedData
    • org.coolmap.core.application.widget.impl.WidgetCMatrix (implements org.coolmap.core.application.listeners.CMatrixListener, org.coolmap.core.application.listeners.DataStorageListener)
    • org.coolmap.core.application.widget.impl.console.WidgetConsole
    • org.coolmap.core.application.widget.impl.WidgetDataMatrix
    • org.coolmap.core.application.widget.impl.WidgetDataPropertyTable
    • org.coolmap.core.application.widget.impl.WidgetMemoryUsage
    • org.coolmap.core.application.widget.impl.ontology.WidgetOntology (implements org.coolmap.core.application.listeners.DataStorageListener, org.coolmap.core.application.listeners.OntologyListener, org.coolmap.core.application.listeners.TreeNodesSelectedListener)
    • org.coolmap.core.application.widget.impl.WidgetPointAnnotation (implements org.coolmap.core.application.listeners.ActiveCoolMapChangedListener, org.coolmap.core.data.listeners.CObjectListener, org.coolmap.core.canvas.listeners.CViewListener)
    • org.coolmap.core.application.widget.impl.WidgetRadar
    • org.coolmap.core.application.widget.impl.WidgetSearch (implements org.coolmap.core.application.listeners.ActiveCoolMapChangedListener, org.coolmap.core.data.listeners.CObjectListener)
    • org.coolmap.core.application.widget.impl.WidgetSyncer (implements org.coolmap.core.data.listeners.CObjectListener, org.coolmap.core.canvas.listeners.CViewListener, org.coolmap.core.application.listeners.DataStorageListener)
    • org.coolmap.core.application.widget.impl.WidgetUserGroup (implements org.coolmap.core.application.listeners.DataStorageListener)
    • org.coolmap.core.application.widget.impl.WidgetViewHierarchy
    • org.coolmap.core.application.widget.impl.WidgetViewport
    • org.coolmap.core.application.widget.impl.WidgetViewRenderer (implements org.coolmap.core.application.listeners.ActiveCoolMapChangedListener)
  • org.coolmap.core.application.widget.WidgetMaster
  • java.awt.event.WindowAdapter (implements java.awt.event.WindowFocusListener, java.awt.event.WindowListener, java.awt.event.WindowStateListener)
    • org.coolmap.core.application.utils.AppClosingWindowAdapter
  • org.coolmap.core.canvas.ui.ZoomControl
  • org.coolmap.core.data.state.misc.ZoomTracker (implements org.coolmap.core.data.state.CObjectStateStoreListener)

Interface Hierarchy

• org.coolmap.core.application.listeners.ActiveCoolMapChangedListener
• org.coolmap.core.data.ontology.CanProduceOntology
• org.coolmap.core.application.listeners.CMatrixListener
• org.coolmap.core.data.listeners.CObjectListener
  • org.coolmap.core.canvas.ui.sidemaps.SideMap<BASE,VIEW> (also extends org.coolmap.core.canvas.listeners.CViewListener, org.coolmap.core.util.StateSavable)
    • org.coolmap.core.canvas.ui.sidemaps.SidePanelHighlighter<BASE,VIEW,VALUE>
    • org.coolmap.core.canvas.ui.sidemaps.SideTree (also extends org.coolmap.core.canvas.listeners.CViewListener, org.coolmap.core.canvas.ui.sidemaps.Selectable<T>)
  • org.coolmap.core.canvas.ui.sidemaps.SidePanelHighlighter<BASE,VIEW,VALUE>
  • org.coolmap.core.canvas.ui.sidemaps.SideTree (also extends org.coolmap.core.canvas.listeners.CViewListener, org.coolmap.core.canvas.ui.sidemaps.Selectable<T>, org.coolmap.core.canvas.ui.sidemaps.SideMap<BASE,VIEW>)
• org.coolmap.core.data.state.CObjectStateStoreListener
• org.coolmap.core.api.data.matrix.CoolMapMatrix<T>
• org.coolmap.core.api.io.data.CoolMapMatrixImporter<T>
• org.coolmap.core.application.io.external.CoolMapObjectImporter
• org.coolmap.core.api.data.ontology.CoolMapOntology
• org.coolmap.core.api.io.ontology.CoolMapOntologyImporter
• org.coolmap.core.canvas.listeners.CViewListener
  • org.coolmap.core.canvas.ui.sidemaps.SideMap<BASE,VIEW> (also extends org.coolmap.core.data.listeners.CObjectListener, org.coolmap.core.util.StateSavable)
    • org.coolmap.core.canvas.ui.sidemaps.SidePanelHighlighter<BASE,VIEW,VALUE>
    • org.coolmap.core.canvas.ui.sidemaps.SideTree (also extends org.coolmap.core.canvas.listeners.CViewListener, org.coolmap.core.canvas.ui.sidemaps.Selectable<T>)
  • org.coolmap.core.canvas.ui.sidemaps.SidePanelHighlighter<BASE,VIEW,VALUE>
  • org.coolmap.core.canvas.ui.sidemaps.SideTree (also extends org.coolmap.core.canvas.ui.sidemaps.Selectable<T>, org.coolmap.core.canvas.ui.sidemaps.SideMap<BASE,VIEW>)
• org.coolmap.core.application.listeners.DataPropertyTableListener
• org.coolmap.core.application.listeners.DataStorageListener
• org.coolmap.core.util.filter.Filter<VIEW>
• org.coolmap.core.api.aggregation.IdToSidePanelDisplayConverter<VALUE>
• org.coolmap.core.application.io.internal.cmatrix.interfaces.InternalCoolMapMatrixExporter
• org.coolmap.core.application.io.internal.dataProperty.InternalDataPropertyTableExporter
• org.coolmap.core.application.io.internal.dataProperty.InternalDataPropertyTableImporter
• org.coolmap.core.canvas.ui.viewmaps.MapLayer<BASE,VIEW>
• org.coolmap.core.application.listeners.MessageHandler
• org.coolmap.core.canvas.ui.sidemaps.listener.NodeToExpandEventListener
• org.coolmap.core.application.widget.impl.ontology.OntologyBrowserActiveTermChangedListener
• org.coolmap.core.application.listeners.OntologyListener
• org.coolmap.core.data.ontology.OntologyProvider
• net.xeoh.plugins.base.Plugin
  • org.coolmap.core.application.plugin.CoolMapPlugin
• org.coolmap.core.api.util.Reorderable
• org.coolmap.core.canvas.ui.sidemaps.Selectable<T>
  • org.coolmap.core.canvas.ui.sidemaps.SideTree (also extends org.coolmap.core.canvas.listeners.CViewListener, org.coolmap.core.canvas.ui.sidemaps.SideMap<BASE,VIEW>)
• org.coolmap.core.api.aggregation.SidePanelValueAggregator<VALUE,AggregationMethodEnum>
• org.coolmap.core.api.aggregation.SidePanelValueToColorMapper<VALUE>
• org.coolmap.core.canvas.ui.sidemaps.listener.SideTreeNodeListExpandingListener
• org.coolmap.core.util.StateSavable
  • org.coolmap.core.canvas.ui.sidemaps.SideMap<BASE,VIEW> (also extends org.coolmap.core.data.listeners.CObjectListener, org.coolmap.core.canvas.listeners.CViewListener)
    • org.coolmap.core.canvas.ui.sidemaps.SidePanelHighlighter<BASE,VIEW,VALUE>
    • org.coolmap.core.canvas.ui.sidemaps.SideTree (also extends org.coolmap.core.canvas.listeners.CViewListener, org.coolmap.core.canvas.ui.sidemaps.Selectable<T>)
  • org.coolmap.core.canvas.ui.sidemaps.SidePanelHighlighter<BASE,VIEW,VALUE>
  • org.coolmap.core.canvas.ui.sidemaps.SideTree (also extends org.coolmap.core.canvas.listeners.CViewListener, org.coolmap.core.canvas.ui.sidemaps.Selectable<T>, org.coolmap.core.canvas.ui.sidemaps.SideMap<BASE,VIEW>)
• org.coolmap.core.application.listeners.TreeNodesSelectedListener

Enum Hierarchy

• java.lang.Object
  • java.lang.Enum<E> (implements java.lang.Comparable<T>, java.io.Serializable)
    • org.coolmap.core.util.filter.ViewFilterType
    • org.coolmap.core.util.filter.CombinationFilterMode
    • org.coolmap.core.data.DataRegionEnum
    • org.coolmap.core.data.DataLevelEnum
    • org.coolmap.core.data.cmatrixview.model.VNode.VNodeType
    • org.coolmap.core.util.bioparser.gseagmt.GmtEntry.ID_TYPE
    • org.coolmap.core.data.entity.model.DataPropertyTable.DataPropertyContinuityType
    • org.coolmap.core.application.ui.object.DataImportingDialog.DataMatrixType
    • org.coolmap.core.application.utils.ActiveCoolMapObjectListenerTunnel (implements org.coolmap.core.data.listeners.CObjectListener, org.coolmap.core.canvas.listeners.CViewListener)
    • org.coolmap.core.application.widget.Widget.WidgetGroup
    • org.coolmap.core.data.ontology.util.ViewDirectionEnum
    • org.coolmap.core.data.ontology.util.OntologySourceEnum
    • org.coolmap.core.application.io.FileDelimiterEnum
    • org.coolmap.core.data.ontology.CoolMapOntologyFileFormatEnum
    • org.coolmap.core.util.filter.util.ViewFilterDirectionEnum
    • org.coolmap.core.api.aggregation.util.ContinuousValueAggregationMethod
    • org.coolmap.core.api.aggregation.util.CategoricalValueAggregationMethod
    • org.coolmap.core.util.CImageGradient.InterType